Image Analysis Challenges in Molecular Microscopy

January 28 - February 1, 2008

Schedule

All times in this Schedule are Pacific Time (PT)

Monday, January 28, 2008

Morning Session

8:00 - 8:50 Check-In/Breakfast (Hosted by IPAM)
8:50 - 9:00 Welcome and Opening Remarks
9:00 - 9:45
Sriram Subramaniam (National Institutes of Health (NIH))

Towards visualizing the architectures of cells and viruses at molecular resolution.

9:45 - 10:00 Break
10:00 - 10:45
Frank Natterer (Westfälische Wilhelms Universität Münster)

Imaging with the Helmholtz equation
PDF Presentation

10:45 - 11:00 Break
11:00 - 11:45
Chandrajit Bajaj (University of Texas at Austin)

MOLECULAR ELECTRON MICROSCOPY TO BIO-PHYSICAL MODELING AND ANALYSIS
PDF Presentation

11:45 - 1:45 Lunch (on your own)

Afternoon Session

1:45 - 2:30
Martin Rumpf (Rheinische Friedrich-Wilhelms-Universität Bonn)

Extracting grain boundaries and macroscopic deformations from images on atomic scale
PDF Presentation

2:30 - 2:45 Break
2:45 - 3:30
Hong Zhou (University of California, Los Angeles (UCLA))

Toward atomic resolution structural determination by cryoEM

3:30 - 3:45 Break
3:45 - 4:45 Tour of UCLA's Electron Imaging Center

Tuesday, January 29, 2008

Morning Session

8:00 - 9:00 Continental Breakfast
9:00 - 9:45
Alberto Bartesaghi (National Institute of Health NCI)

Challenges in high throughput electron tomography applications

9:45 - 10:00 Break
10:00 - 10:45
Steven Ludtke (Baylor College of Medicine)

Resolution and Dynamics in Single Particle Analysis
PDF Presentation

10:45 - 11:00 Break
11:00 - 11:45
Paul French (Imperial College)

Multidimensional fluorescence imaging

11:45 - 1:45 Lunch (on your own)

Afternoon Session

1:45 - 2:30
2:30 - 2:45 Break
2:45 - 3:30
Gregory Beylkin (University of Colorado, Boulder)

Algorithms and challenges of electron microscope tomography
PDF Presentation

3:30 - 3:45 Break
3:45 - 4:30
4:30 - 6:00 Reception (Location: IPAM Lobby)

Wednesday, January 30, 2008

Morning Session

8:30 - 9:30 Continental Breakfast
9:30 - 10:15
Jose Carazo (Centro Nacional de Biotecnología (CSIS))

EXPLORING THE CONFORMATIONAL FLEXIBILITY OF MACROMOLECULAR NANOMACHINES
PDF Presentation

10:15 - 10:30 Break
10:30 - 11:15
11:15 - 11:30 Break
11:30 - 12:15
Ronald DeVore (University of South Carolina)

A Taste of Compressed Sensing
PDF Presentation

12:15 - 2:00 Lunch (on your own)

Afternoon Session

2:00 - 2:45
2:45 - 3:00 Break
3:00 - 3:45
3:45 - 4:00 Break

Thursday, January 31, 2008

Morning Session

8:00 - 9:00 Continental Breakfast
9:00 - 9:45
Pawel Penczek (University of Texas at Houston - Medical School)

Molecules in motion - towards 4D cryo-EM
PDF Presentation

9:45 - 10:00 Break
10:00 - 10:45
Guillermo Sapiro (University of Minnesota, Twin Cities)

Learning sparse image representations: Theory and applications in tomography

10:45 - 11:00 Break
11:00 - 11:45
Jerry Prince (Johns Hopkins University)

Micro and Macro Structure from Diffusion Weighted MRI
PDF Presentation

11:45 - 1:45 Lunch (on your own)

Afternoon Session

1:45 - 2:30
2:30 - 2:45 Break
2:45 - 3:30
3:30 - 3:45 Break
3:45 - 4:30

Friday, February 1, 2008

Morning Session

8:00 - 9:00 Continental Breakfast
9:00 - 9:45
9:45 - 10:00 Break
10:00 - 10:45
Achilleas Frangakis (EMBL (European Molecular Biology Laboratory))

 

10:45 - 11:00 Break
11:00 - 11:45