Sequence Analysis Toward System Biology

January 9 - 13, 2006

Schedule


Monday, January 9, 2006

9:00 - 10:00
10:30 - 11:30
Sam Karlin (Stanford University)

GENOME COMPARISONS AND ANALYSIS

1:30 - 2:30
3:00 - 4:00
4:00 - 5:00

Tuesday, January 10, 2006

9:00 - 10:00
Mayetri Gupta (University of North Carolina)

From genomic sequence to gene regulation

10:30 - 11:30
Simon Tavaré (University of Southern California)

Genome-wide associations of gene expression variation in humans

1:30 - 2:30
3:00 - 4:00
Frederick Roth (Harvard Medical School)

Genome-Scale Analysis of Alternative Splicing Regulation
Presentation (PowerPoint File)

4:00 - 5:00
Sunduz Keles (University of Wisconsin-Madison)

Mixture modeling for genome-wide localization of transcription factors


Wednesday, January 11, 2006

9:00 - 10:00
10:30 - 11:30
1:30 - 2:30
3:00 - 4:00
Shamil Sunyaev (Harvard Medical School)

Evolutionary analysis of genome variation

4:00 - 5:00
Carlos Bustamante (Cornell University)

"Population Genetic Inference from SNP Data"


Thursday, January 12, 2006

9:00 - 10:00
Xiaole Liu (Dana-Farber Cancer Institute)

MATCh: Model-based Analysis of Tiling-arrays for ChIP-chip

10:30 - 11:30
Harmen Bussemaker (Columbia University)

CONDITION-SPECIFIC REGULATION OF mRNA STABILITY IN YEAST
PDF Presentation

1:30 - 2:30
Michael Elowitz (California Institute of Technology)

Gene Circuits at the Single Cell Level

3:00 - 4:00
Hao Li (University of California, San Francisco)

Regulatory Complexity of Yeast Transcription Networks

4:00 - 5:00
Terence Hwa (University of California, San Diego)

Quantitative Study of Gene Regulation


Friday, January 13, 2006

9:00 - 10:00
10:30 - 11:30
Michael Waterman (University of Southern California)

Whole Genome Optical Mapping
Presentation (PowerPoint File)

1:30 - 2:30
Trey G. Ideker (University of California at San Diego)

Protein Network Comparative Genomics
Presentation (PowerPoint File)

3:00 - 4:00